SNP Profiles of GU 114/P View Data

Show/Hide Profiles

	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	TT	CC	GG	TT	AA	AA	CC	GG	GG	GG	CC	AA
1._RUQ_813	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
2._RUQ_813	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
3._GU_114_/P	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
4._GU_114_/P	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
5._GU_114_/P	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
6._GU_114_/P	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
7._GU_114_/P	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
8._GU_114_/P	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
9._GU_114_/P	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
10._GU_114_/P	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
11._RUQ_813	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_
12._RUQ_813	_	_	_	_	_	_	_	AA	_	_	_	GG	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	AA	CT	CC	CT	AA	AG	CC	AT	CC	CC	CT	AG	CC
1._RUQ_813	GG	_	_	_	_	AA	_	CC	_	CC	CC	_	_	_
2._RUQ_813	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
3._GU_114_/P	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
4._GU_114_/P	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
5._GU_114_/P	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
6._GU_114_/P	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
7._GU_114_/P	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
8._GU_114_/P	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
9._GU_114_/P	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
10._GU_114_/P	_	_	_	_	_	AA	_	CC	_	CC	_	_	_	_
11._RUQ_813	_	_	_	_	_	_	_	CC	_	CC	CC	_	_	_
12._RUQ_813	GG	_	_	_	_	AA	_	CC	_	CC	GG	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	CC	CC	GG	AA	TT	TT	AA	AA	CC	GG	GG	CC	AG
1._RUQ_813	_	_	CC	GG	AA	_	_	AA	_	_	GG	-	_	AG
2._RUQ_813	AA	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
3._GU_114_/P	AA	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
4._GU_114_/P	AG	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
5._GU_114_/P	AG	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
6._GU_114_/P	AG	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
7._GU_114_/P	AG	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
8._GU_114_/P	AG	_	_	GG	_	_	_	_	_	_	GG	_	_	_
9._GU_114_/P	AG	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
10._GU_114_/P	AG	_	_	GG	_	_	_	_	_	_	GG	_	_	AG
11._RUQ_813	_	_	_	_	_	_	_	_	_	_	CC	_	_	_
12._RUQ_813	_	_	_	CC	AA	_	_	AA	_	CC	CC	GG	_	AG

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	CC	AA	CC	GG	TT	CC	GG	AA	TT	GG	TT	AG	GG
1._RUQ_813	CC	_	_	_	_	_	_	_	_	TT	_	_	_	_
2._RUQ_813	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
3._GU_114_/P	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
4._GU_114_/P	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
5._GU_114_/P	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
6._GU_114_/P	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
7._GU_114_/P	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
8._GU_114_/P	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
9._GU_114_/P	_	_	_	_	GG	_	CC	_	_	TT	_	_	_	_
10._GU_114_/P	_	_	_	_	_	_	CC	_	_	TT	_	_	_	_
11._RUQ_813	_	_	_	_	_	_	_	_	_	_	_	_	_	_
12._RUQ_813	_	_	_	_	GG	_	_	_	_	AA	_	_	_	_

	57	58	59
_Input profile	CC	TT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_813	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_813	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._GU_114_/P	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._GU_114_/P	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._GU_114_/P	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._GU_114_/P	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._GU_114_/P	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._GU_114_/P	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._GU_114_/P	_	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._GU_114_/P	CC	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._RUQ_813	GG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._RUQ_813	GG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: GU_114_/P RUQ_813

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._GU_114_/P RUQ_813

identical
16 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._GU_114_/P RUQ_813

identical
13 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

3._GU_114_/P

identical
13 shared markers

View View all Clone Any

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: CAMPUS 1 A X3 Y18

Dapeng Zhang, 2016

4._GU_114_/P

96.2 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8413 1

Dapeng Zhang, 2016

5._GU_114_/P

96.2 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8413 2

Dapeng Zhang, 2016

6._GU_114_/P

96.2 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8413 3

Dapeng Zhang, 2016

7._GU_114_/P

96.2 %
13 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8413 7

Dapeng Zhang, 2016

8._GU_114_/P

95.8 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8413 5

Dapeng Zhang, 2016

9._GU_114_/P

95.8 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8413 12

Dapeng Zhang, 2016

10._GU_114_/P

95.8 %
12 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8413 9

Dapeng Zhang, 2016

11._GU_114_/P RUQ_813

71.4 %
7 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

12._GU_114_/P RUQ_813

70.6 %
17 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1253	53	TcSNP1275	54	TcSNP1293	55	TcSNP1401
56	TcSNP1404	57	TcSNP1458	58	TcSNP1524	59	TcSNP1527